- supported by:
- collaborating with:
What is insilicoIDE
insilicoIDE (Integrated Development Environment) is a browser & editor of the multi-level models written in insilicoML format and/or CellML format.
The insilicoIDE can export C++ sourcecodes including numerical integration solvers. Thus users can perform simulations easily by compiling them.
insilicoIDE 1.0
The specification of the insilicoML (ISML) is innovated. Now the version of ISML is 1.0. Based upon the upgrade of the ISML specification, we also upgraded the insilicoIDE (ISIDE). There exists a converter from ISML0.1 (previous version) to the ISML1.0, which works with ISIDE1.x.
Specifications
insilicoIDE 1.0 can work on Windows XP and Mac OSX. Unix like operating systems such as FreeBSD, Linux will be supported soon. The ISIDE 1.0 uses XML Database as basis of the application. To access to the information in the database, ISIDE uses Python API based on Python 2.5. The graphical user interface is built with Qt and C++. Hence to execute ISIDE, the system requires at least dbxml library, python, Qt library. Besides that in the codes we used boost library. For more details, see the install guide.
Downloads
- Latest File Releases
-
insilicoIDE includes inslicoSim that can parse ISML directly and, moreover, can perform parallel computation which is useful for large scale simulations (Mac version).
insilicoIDE1.1 can export ISML models into FreeFEM format (with some limitations).
- insilicoIDE 1.1.1 for Windows (includes Libraries, model samples and insilicoSim)
- insilicoIDE 1.1.1 for Mac OSX 10.6 (includes Libraries, model samples and insilicoSim)
- insilicoIDE 1.1.1 for Mac OSX 10.5 Intel (includes Libraries, model samples and insilicoSim)
Change Log
- insilicoIDE 1.1.1
- Model Editor is updated. Add view function of conditonal-type physical-quantity implementation.
- insilicoSim is updated. Add progress bar of the simulation. Several bugs have been fixed.
- Several bugs have been fixed.
- insilicoIDE 1.1.0
- The library to handle XML document is changed to libxml2 from Oracle Berkeley DB XML, which improves the execution speed of the ISIDE.
- ISIDE can export ISML models into FreeFEM format (with some limitations).
- The default install path on Windows has been changed. Now the installer for windows installs packages to "C:\Program Files\insilicoPlatform" instead of "C:\Program Files\insilicoML Platform".
- insilicoIDE 1.0.4
- Update Berkeley DB XML to 2.5.16 and Qt to 4.6.
- insilicoIDE 1.0.3
- insilicoSim (a simulator of ISML) is added.
- insilico terminal and Model Editor is updated. Several bugs have been fixed.
- insilicoIDE 1.0.2
- Directory structure is changed (Mac OSX version).
- Model Editor is updated. Several bugs have been fixed.
- insilicoIDE 1.0.0b
- insilicoIDE beta version.
- insilicoIDE 1.1.x Documents
-
insilicoIDE 1.1.x manuals (PDF)
- Notes for insilicoIDE Python API -- Getting started with insilicoIDE Python API
- insilicoIDE 1.1 Getting Started (GUI) -- How to create an ISML model by using Model Editor in insilicoIDE
- insilicoIDE 1.1 Getting Started (CLI) -- How to create an ISML model by using insilico terminal in insilicoIDE
- Instructions on insilicoSim -- How to use insilicoSim
- Example: 2D FitzHugh-Nagumo model -- Notes for a sample model of FreeFEM converter
- What is FreeFem++ ? -- Notes for FreeFEM++
- FreeFem++ download information -- FreeFem++ download and installation guide
- File Releases and Manuals
-
insilicoIDE 1.1.x
Ver. Filename Date Platform Install Memo 1.1.1 insilicoIDE1.1.1.exe 05 Mar 2010 Windows XP, 2000 - 1.1.1 insilicoIDE1.1.1_osx10.6.dmg 05 Mar 2010 Mac OSX 10.6 install_memo_osx.txt 1.1.1 insilicoIDE1.1.1_osx10.5.dmg 05 Mar 2010 Mac OSX 10.5 Intel install_memo_osx.txt 1.1.0 insilicoIDE1.1.0.exe 16 Feb 2010 Windows XP, 2000 - 1.1.0 insilicoIDE1.1.0_osx10.6.dmg 16 Feb 2010 Mac OSX 10.6 install_memo_osx.txt 1.1.0 insilicoIDE1.1.0_osx10.5.dmg 16 Feb 2010 Mac OSX 10.5 Intel install_memo_osx.txt insilicoIDE 1.0.x
Ver. Filename Date Platform Install Memo 1.0.4 insilicoIDE1.0.4.exe 15 Jan 2010 Windows XP, 2000 install_memo_windows.txt 1.0.4 insilicoIDE1.0.4_osx10.6.dmg 15 Jan 2010 Mac OSX 10.6 install_memo_osx.txt 1.0.4 insilicoIDE1.0.4_osx10.5.dmg 15 Jan 2010 Mac OSX 10.5 Intel install_memo_osx.txt 1.0.3 insilicoIDE1.0.3.exe 8 Jan 2010 Windows XP, 2000 install_memo_windows.txt 1.0.3 insilicoIDE1.0.3_osx10.6.dmg 13 Jan 2010 Mac OSX 10.6 install_memo_osx.txt 1.0.3 insilicoIDE1.0.3_osx10.5.dmg 13 Jan 2010 Mac OSX 10.5 Intel install_memo_osx.txt 1.0.2 insilicoIDE1.0.2.zip 30 Nov 2009 Windows XP, 2000 install_memo_windows.txt 1.0.2 insilicoIDE1.0.2.tar.gz 30 Nov 2009 Mac OSX 10.5 Intel - 1.0.0b insilicoIDE1.0.0b_win.zip 13 Oct 2009 Windows XP, 2000 install_memo_windows.txt 1.0.0b insilicoIDE1.0.0b.pkg 13 Oct 2009 Mac OSX 10.5 Intel - insilicoIDE 0.3.x
Ver. Filename Date Platform How to Install User Manual 0.3.1 insilicoIDEsetup.exe 26 Feb 2009 Windows XP, 2000 howtoinstall_0.3.1.html readme_getting_started.pdf 0.3.1 insilicoIDE0.3.1.zip 26 Feb 2009 Windows XP, 2000 howtoinstall_0.3.1.html readme_getting_started.pdf 0.3.0 insilicoIDEsetup.exe 06 Feb 2009 Windows XP, 2000 howtoinstall_0.3.html readme_getting_started.pdf insilicoIDE 0.2.x
Ver. Filename Date Platform How to Install User Manual 0.2.6 insilicoIDE0.2.6.zip 16 Dec 2008 Windows XP, 2000 howtoinstall_0.2.html gettingstarted_0.2.5-1.html 0.2.5 insilicoIDE0.2.5.zip 20 Oct 2008 Windows XP, 2000 howtoinstall_0.2.html gettingstarted_0.2.5-1.html 0.2.4 insilicoIDE0.2.4.zip 18 Sep 2008 Windows XP, 2000 howtoinstall_0.2.html gettingstarted_0.2-1.html 0.2.3 insilicoIDE0.2.3.zip 11 Sep 2008 Windows XP, 2000 howtoinstall_0.2.html gettingstarted_0.2-1.html 0.2.2 insilicoIDE0.2.2.zip 03 Sep 2008 Windows XP, 2000 howtoinstall_0.2.html gettingstarted_0.2-1.html 0.2.1 insilicoIDE0.2.1.zip 11 Aug 2008 Windows XP, 2000 howtoinstall_0.2.html gettingstarted_0.2-1.html 0.2.0 insilicoIDE0.2.zip 15 Jul 2008 Windows XP, 2000 howtoinstall_0.2.html gettingstarted_0.2-1.html insilicoIDE 0.1.x
Ver. Filename Date Platform How to Install User Manual 0.1.1 insilicoIDE0.1.1.zip 20 Jun 2008 Windows XP, 2000 howtoinstall_0.1.1.html gettingstarted_0.1.1-1.html 0.1.1 insilicoIDE 0.1.1pg.zip 20 Jun 2008 Windows XP, 2000 howtoinstall_0.1.1.html gettingstarted_0.1.1-1.html 0.1.0 insilicoIDE0.1.zip 21 May 2008 Windows XP, 2000 howtoinstall_0.1.0.html gettingstarted_0.1.0-1.html 0.1.0 insilicoIDE 0.1.0.pg.zip 21 May 2008 Windows XP, 2000 howtoinstall_0.1.0.html gettingstarted_0.1.0-1.html