In this release (ver. 1.2)  Python APIs are partially sorted out.
Especially baseapi/definition.py and related APIs such as
baseapi/definition.py
baseapi/definition_extraimplementation.py
baseapi/definition_initialvalue.py
and
convert/definition_extraimplementation_parser.py
convert/definition_initialvalue_parser.py
convert/definition_parser.py
are modified.

In this release, definition.py acts as a parental class of  
definition_extraimplementation.py, definition_implementation.py and  
definition_initialvalue.py,
and definition_parser.py acts as a parental class of  
definition_extraimplementation_parser.py,  
definition_implementation_parser.py and  
definition_initialvalue_parser.py

This reformation of APIs might causes errors in scripts written by  
users based on Python APIs for ver. 1.1.2 and before.
Main changes are the following:

definition_implementation_***  --> definition_***
definition_initialvalue_***  --> definition_***
definition_extraimplementation_*** --> definition_***

Namely, we changed to let similar functions have the same name.
That's it. Only by replacing the name of functions according to above  
rule, errors must be solved.

Previously name of functions were different depending on Classes.
For example, DefinitionInitialvalue class has a function  
set_initialvalue_definition() and DefinitionExtraimplementation class  
has a function set_extraimplementation_definition().
These classes deal with definition tag in ISML at different location,  
e.g. in initial-value or extra-implementation, and these classes work  
in quite similar way.
Many of functions can be shared among them.
Hence we decided up to rename all functions, and to create a new  
parental class "Definition" which implements all most all functions  
managing the definition tag in ISML.
And also we added a class DefinitionImplementation which corresponds  
to Definition class before this reformation.

This simplification must be better for users to understand APIs.

If you have still errors in your scripts, please feel free to post  
questions to admin@physiome.jp.